Phocaeicola dorei CL03T12C01

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola dorei CL03T12C01 is a nonsporulating, Gram-negative rod that thrives optimally at a temperature of 37.0°C and relies on a chemoheterotrophic metabolism for energy. This anaerobic microbe is found in multiple habitats, indicating a versatile ecological presence. The ability to grow in various environments suggests that P. dorei CL03T12C01 may play significant roles in microbial communities associated with diverse substrates, potentially contributing to nutrient cycling in anaerobic conditions. Further research into its specific ecological interactions could provide insights into its functional roles in these habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola dorei
StrainCL03T12C01

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola dorei CL03T12C01
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola dorei CL03T12C01


Gene Summary

Adenine Count

1578661 bp

Thymine Count

1570423 bp

Guanine Count

1116965 bp

Cytosine Count

1121200 bp

Genome Length

5387249 bp

Protein-coding Genes

4417 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna topoisomerase iiiHMPREF1065_03883Not Available-4744812 - 474689977530.8
hypothetical proteinHMPREF1065_03884Not Available-4746961 - 474852959946.3
hypothetical proteinHMPREF1065_03885Not Available-4748551 - 474886512430.2
excisionase family dna binding domain-containing proteinHMPREF1065_03886Not Available-4748905 - 474926113227.9
hypothetical proteinHMPREF1065_03887Not Available+4749464 - 474976311590.3
excisionase family dna binding domain-containing proteinHMPREF1065_03888Not Available+4749828 - 475010310641.9
hypothetical proteinHMPREF1065_03889Not Available-4750182 - 475054413553.6
hypothetical proteinHMPREF1065_03890Not Available-4750557 - 475179248020.3
hypothetical proteinHMPREF1065_03891Not Available-4752271 - 475321535874.2
rna polymerase sigma-70 factor, expansion family 1HMPREF1065_03892Not Available-4753334 - 475392122846.5

Displaying genes 3981 – 3990 of 4523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites