Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease la | HMPREF1065_00272 | Not Available | + | 317282 - 319759 | 92593.3 |
| queuine trna-ribosyltransferase | HMPREF1065_00273 | Not Available | + | 319762 - 320892 | 42665.6 |
| hypothetical protein | HMPREF1065_00274 | Not Available | + | 320903 - 322075 | 45473.9 |
| had hydrolase, family ia | HMPREF1065_00275 | Not Available | - | 322076 - 322696 | 23485.9 |
| hypothetical protein | HMPREF1065_00276 | Not Available | - | 322855 - 323349 | 18414.2 |
| phosphoserine phosphatase serb | HMPREF1065_00277 | Not Available | + | 323622 - 324854 | 46050.0 |
| hypothetical protein | HMPREF1065_00278 | Not Available | + | 324875 - 326146 | 47278.9 |
| hypothetical protein | HMPREF1065_00279 | Not Available | - | 326859 - 327647 | 29433.2 |
| nucleotide sugar dehydrogenase | HMPREF1065_00280 | Not Available | - | 327668 - 328981 | 48178.3 |
| hypothetical protein | HMPREF1065_00281 | Not Available | + | 329100 - 330230 | 41970.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

