Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00253 | Not Available | - | 286394 - 286921 | 20472.6 |
| hypothetical protein | HMPREF1065_00254 | Not Available | - | 287103 - 288728 | 61616.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_00255 | Not Available | - | 288740 - 292339 | 133600.0 |
| hypothetical protein | HMPREF1065_00256 | Not Available | - | 292893 - 293105 | 8232.44 |
| Trna-pro | Not Available | Not Available | + | 293245 - 293322 | Not Available |
| hypothetical protein | HMPREF1065_00257 | Not Available | - | 293477 - 294808 | 50489.9 |
| hypothetical protein | HMPREF1065_00258 | Not Available | - | 294805 - 296172 | 51908.1 |
| hypothetical protein | HMPREF1065_00259 | Not Available | + | 296395 - 297318 | 34947.7 |
| hypothetical protein | HMPREF1065_00260 | Not Available | + | 297366 - 298835 | 55930.4 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_00261 | Not Available | + | 298920 - 300170 | 48027.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

