Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac | HMPREF1065_00233 | Not Available | - | 265229 - 266680 | 51364.1 |
| hypothetical protein | HMPREF1065_00234 | Not Available | + | 266874 - 267437 | 21000.7 |
| hypothetical protein | HMPREF1065_00235 | Not Available | + | 267502 - 271962 | 166515.0 |
| hypothetical protein | HMPREF1065_00236 | Not Available | + | 272017 - 273042 | 39355.9 |
| hypothetical protein | HMPREF1065_00237 | Not Available | + | 273054 - 273941 | 33311.6 |
| hypothetical protein | HMPREF1065_00238 | Not Available | + | 274056 - 274646 | 21473.3 |
| methylated-dna-[protein]-cysteine s-methyltransferase | HMPREF1065_00239 | Not Available | - | 274740 - 275267 | 19706.0 |
| aspartyl-trna synthetase | HMPREF1065_00240 | Not Available | - | 275442 - 277205 | 66543.9 |
| hypothetical protein | HMPREF1065_00241 | Not Available | - | 277340 - 277636 | 11709.2 |
| hypothetical protein | HMPREF1065_00242 | Not Available | - | 277656 - 277826 | 6257.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

