Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | HMPREF1065_00148 | Not Available | - | 178343 - 179302 | 34702.9 |
| hypothetical protein | HMPREF1065_00149 | Not Available | - | 179475 - 179630 | 5827.19 |
| 50s ribosomal protein l33 | HMPREF1065_00150 | Not Available | - | 179640 - 179828 | 7205.97 |
| 50s ribosomal protein l28 | HMPREF1065_00151 | Not Available | - | 179849 - 180109 | 9789.04 |
| competence/damage-inducible protein cina domain | HMPREF1065_00152 | Not Available | - | 180214 - 180714 | 17498.8 |
| glycoprotease/kae1 family metallohydrolase | HMPREF1065_00153 | Not Available | - | 180737 - 181756 | 36941.3 |
| methionine aminopeptidase, type i | HMPREF1065_00154 | Not Available | - | 181781 - 182635 | 31915.3 |
| hypothetical protein | HMPREF1065_00155 | Not Available | + | 182872 - 183090 | 8234.71 |
| hypothetical protein | HMPREF1065_00156 | Not Available | - | 183150 - 183701 | 20072.3 |
| hypothetical protein | HMPREF1065_00157 | Not Available | - | 183714 - 184622 | 34097.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

