Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00123 | Not Available | + | 145722 - 146501 | 28587.4 |
| dihydroorotate dehydrogenase | HMPREF1065_00124 | Not Available | + | 146489 - 147400 | 32324.4 |
| trna (guanine-n(1)-)-methyltransferase | HMPREF1065_00125 | Not Available | - | 147765 - 148439 | 25453.7 |
| dna ligase | HMPREF1065_00126 | Not Available | + | 148539 - 150536 | 75132.7 |
| dihydrodipicolinate synthase | HMPREF1065_00127 | Not Available | + | 150638 - 151531 | 32818.2 |
| Trna-arg | Not Available | Not Available | + | 152080 - 152156 | Not Available |
| Trna-arg | Not Available | Not Available | + | 152185 - 152261 | Not Available |
| hypothetical protein | HMPREF1065_00128 | Not Available | - | 152351 - 154660 | 87780.8 |
| 16s ribosomal rna | Not Available | Not Available | + | 156586 - 158105 | Not Available |
| chaperone htpg | HMPREF1065_00129 | Not Available | - | 154790 - 156835 | 78174.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

