Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | HMPREF1065_00103 | Not Available | - | 127317 - 127691 | 14179.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | HMPREF1065_00104 | Not Available | + | 127770 - 128528 | 28185.6 |
| hypothetical protein | HMPREF1065_00105 | Not Available | + | 128529 - 129815 | 48624.5 |
| hypothetical protein | HMPREF1065_00106 | Not Available | + | 129887 - 131005 | 42459.7 |
| hypothetical protein | HMPREF1065_00107 | Not Available | + | 131013 - 131801 | 29008.5 |
| tigr02453 family protein | HMPREF1065_00108 | Not Available | + | 131877 - 132542 | 25996.8 |
| hypothetical protein | HMPREF1065_00109 | Not Available | + | 132579 - 133019 | 16218.5 |
| hypothetical protein | HMPREF1065_00110 | Not Available | + | 133048 - 135075 | 78087.2 |
| hypothetical protein | HMPREF1065_00111 | Not Available | + | 135079 - 136230 | 44115.7 |
| prolyl-trna synthetase | HMPREF1065_00112 | Not Available | + | 136344 - 137834 | 56819.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

