Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00087 | Not Available | - | 109429 - 110148 | 24484.1 |
| mate efflux family protein | HMPREF1065_00088 | Not Available | - | 110197 - 111540 | 49329.3 |
| serine hydroxymethyltransferase | HMPREF1065_00089 | Not Available | - | 111742 - 113022 | 46843.6 |
| hypothetical protein | HMPREF1065_00090 | Not Available | - | 113279 - 113998 | 27505.5 |
| hypothetical protein | HMPREF1065_00091 | Not Available | - | 114008 - 114595 | 22024.8 |
| aspartate carbamoyltransferase regulatory chain | HMPREF1065_00092 | Not Available | - | 114601 - 115068 | 17419.4 |
| aspartate carbamoyltransferase | HMPREF1065_00093 | Not Available | - | 115078 - 116019 | 36265.7 |
| hypothetical protein | HMPREF1065_00094 | Not Available | + | 116180 - 118507 | 88395.2 |
| 5s ribosomal rna | Not Available | Not Available | + | 116952 - 117061 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 117142 - 119449 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

