Phocaeicola dorei CL03T12C01

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola dorei CL03T12C01 is a nonsporulating, Gram-negative rod that thrives optimally at a temperature of 37.0°C and relies on a chemoheterotrophic metabolism for energy. This anaerobic microbe is found in multiple habitats, indicating a versatile ecological presence. The ability to grow in various environments suggests that P. dorei CL03T12C01 may play significant roles in microbial communities associated with diverse substrates, potentially contributing to nutrient cycling in anaerobic conditions. Further research into its specific ecological interactions could provide insights into its functional roles in these habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola dorei
StrainCL03T12C01

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola dorei CL03T12C01
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola dorei CL03T12C01


Gene Summary

Adenine Count

1578661 bp

Thymine Count

1570423 bp

Guanine Count

1116965 bp

Cytosine Count

1121200 bp

Genome Length

5387249 bp

Protein-coding Genes

4417 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHMPREF1065_00087Not Available-109429 - 11014824484.1
mate efflux family proteinHMPREF1065_00088Not Available-110197 - 11154049329.3
serine hydroxymethyltransferaseHMPREF1065_00089Not Available-111742 - 11302246843.6
hypothetical proteinHMPREF1065_00090Not Available-113279 - 11399827505.5
hypothetical proteinHMPREF1065_00091Not Available-114008 - 11459522024.8
aspartate carbamoyltransferase regulatory chainHMPREF1065_00092Not Available-114601 - 11506817419.4
aspartate carbamoyltransferaseHMPREF1065_00093Not Available-115078 - 11601936265.7
hypothetical proteinHMPREF1065_00094Not Available+116180 - 11850788395.2
5s ribosomal rnaNot AvailableNot Available+116952 - 117061Not Available
23s ribosomal rnaNot AvailableNot Available+117142 - 119449Not Available

Displaying genes 101 – 110 of 4523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites