Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase, class i/ii | HMPREF0220_0016 | Not Available | - | 12879 - 13943 | 41288.9 |
| cobalamin biosynthesis protein cobd | HMPREF0220_0017 | Not Available | - | 13975 - 14946 | 36272.8 |
| cobyrinic acid a,c-diamide synthase | HMPREF0220_0018 | Not Available | - | 14947 - 16323 | 51850.6 |
| cobyric acid synthase cobq | HMPREF0220_0019 | Not Available | - | 16362 - 17876 | 56539.4 |
| phosphoglycerate mutase family protein | HMPREF0220_0020 | Not Available | - | 18237 - 18851 | 23516.2 |
| adenosylcobinamide-gdp ribazoletransferase | HMPREF0220_0021 | Not Available | - | 18871 - 19644 | 29175.6 |
| putative adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | HMPREF0220_0022 | Not Available | - | 19654 - 20268 | 23815.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | HMPREF0220_0023 | Not Available | - | 20246 - 21292 | 37328.3 |
| hypothetical protein | HMPREF0220_0024 | Not Available | + | 21512 - 21703 | 7505.57 |
| hypothetical protein | HMPREF0220_0025 | Not Available | - | 21744 - 21878 | 5313.52 |
Pathways
423 pathways
