Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative phage-related terminase small subunit | IM33_05045 | P45915 | + | 1035202 - 1035885 | 26630.6 |
| Putative phage terminase large subunit | IM33_05050 | Not Available | + | 1035863 - 1037116 | 48655.2 |
| Phage portal protein, spp1 family | IM33_05055 | P54309 | + | 1037122 - 1038564 | 56034.2 |
| Putative minor head protein | IM33_05060 | Not Available | + | 1038554 - 1040047 | 59045.0 |
| Hypothetical protein | IM33_05065 | Not Available | + | 1040025 - 1040255 | 9021.74 |
| Hypothetical protein | IM33_05070 | Not Available | + | 1040326 - 1040520 | 7148.84 |
| Putative minor structural protein | IM33_05075 | Not Available | + | 1040565 - 1040805 | 9267.97 |
| Hypothetical protein | IM33_05105 | Not Available | + | 1042880 - 1043227 | 13177.0 |
| Putative tail protein | IM33_05110 | Not Available | + | 1043227 - 1043652 | 16156.8 |
| Hypothetical protein | IM33_05115 | Not Available | + | 1043645 - 1044082 | 16735.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.