Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 1 - 2501 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 105 - 1595 | Not Available |
| trka n-terminal domain protein | HMPREF0220_0001 | Not Available | - | 19 - 597 | 22229.1 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 1144 - 1428 | Not Available |
| porphobilinogen synthase | HMPREF0220_0002 | Not Available | - | 740 - 1711 | 36213.6 |
| uroporphyrinogen-iii c-methyltransferase | HMPREF0220_0003 | Not Available | - | 1728 - 3236 | 56019.9 |
| hydroxymethylbilane synthase | HMPREF0220_0004 | Not Available | - | 3217 - 4122 | 33525.9 |
| putative precorrin-2 c(20)-methyltransferase | HMPREF0220_0005 | Not Available | - | 4152 - 4584 | 16396.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 4782 - 4884 | Not Available |
| cobalt chelatase (cbik) | HMPREF0220_0006 | Not Available | - | 4585 - 5625 | 39108.6 |
Pathways
423 pathways
