Amycolatopsis echigonensis str. dsm 45165

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis echigonensis strain DSM 45165 is a Gram-positive bacterium that thrives in aerobic environments, exhibiting optimal growth at a temperature of 29.0 °C. This strain is a member of the genus Amycolatopsis, which is known for its capacity to produce various bioactive compounds, including antibiotics. The Gram-positive nature of A. echigonensis indicates a thick peptidoglycan layer in its cell wall, which is characteristic of this group of bacteria, potentially contributing to its resilience in different environmental conditions. Optimal growth at 29.0 °C suggests that A. echigonensis may be well-suited to moderate temperature habitats, which could include soil or decaying organic matter where it may play a role in nutrient cycling. Its strict aerobic requirement implies that this organism relies on oxygen for its metabolic processes, which could influence its distribution and ecological interactions in various environments. Given its traits, A. echigonensis strain DSM 45165 may be particularly adept at colonizing environments where organic matter decomposition occurs, thus contributing to the breakdown of complex organic compounds. Furthermore, the potential for bioactive compound production underscores its significance in biotechnological applications, possibly leading to the discovery of novel antimicrobial agents. This underscores the importance of studying such microorganisms not only for their ecological roles but also for their potential utility in medicine and industry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis echigonensis
Straindsm 45165

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis echigonensis str. dsm 45165


Gene Summary

Adenine Count

1417701 bp

Thymine Count

1420489 bp

Guanine Count

3248395 bp

Cytosine Count

3226378 bp

Genome Length

9312963 bp

Protein-coding Genes

8661 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+6995103 - 6995134Not Available
IntegraseATK30_6830Not Available-6995265 - 699652147192.6
hypothetical proteinATK30_6831Not Available-6996521 - 699721025536.2
Hypothetical proteinATK30_6832Not Available+6997340 - 69975768829.43
hypothetical proteinATK30_6833Not Available+6997582 - 699810319720.8
Gp59ATK30_6834Not Available+6998100 - 699859117979.2
hypothetical proteinATK30_6835Not Available+6998606 - 699921421851.0
hypothetical proteinATK30_6836Not Available+6999207 - 699956312770.0
Hypothetical proteinATK30_6837Not Available+6999544 - 700049736099.2
Dnab-like dsdna helicaseATK30_6838Not Available+7000494 - 700180448069.1

Displaying genes 1 – 10 of 8762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites