Veillonella seminalis ACS-216-V-Col6b

Gram-negativeObligate anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Veillonellales

Family

Veillonellaceae

Genus

Veillonella

Description

Veillonella seminalis ACS-216-V-Col6b is a Gram-negative, obligate anaerobic bacterium. As a member of the genus Veillonella, this microbe is characterized by its inability to survive in the presence of oxygen, indicating its adaptation to strictly anaerobic environments. Veillonella species are typically found in various anaerobic niches, including the human oral cavity and gastrointestinal tract, where they play a role in the fermentation of organic material. This strain, ACS-216-V-Col6b, likely contributes to the complex microbial community dynamics in these environments, participating in the breakdown of metabolites produced by other anaerobes. The Gram-negative nature of V. seminalis ACS-216-V-Col6b suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which may play a role in its interactions with host tissues and other microbial species. Furthermore, its obligate anaerobic requirement suggests that it may be involved in specific metabolic processes that require reduced oxygen conditions, potentially influencing the overall redox state of its habitat. In summary, Veillonella seminalis ACS-216-V-Col6b exemplifies the ecological role of anaerobic bacteria in nutrient cycling and microbial interactions within low-oxygen environments. Its presence underscores the significance of anaerobes in maintaining homeostasis in microbial ecosystems, with implications for understanding microbial community structure and function in human health and disease.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderVeillonellales
FamilyVeillonellaceae
GenusVeillonella
SpeciesVeillonella seminalis
StrainACS-216-V-Col6b

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Veillonella seminalis ACS-216-V-Col6b


Gene Summary

Adenine Count

669894 bp

Thymine Count

661166 bp

Guanine Count

505632 bp

Cytosine Count

449602 bp

Genome Length

2286294 bp

Protein-coding Genes

1831 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
methylmalonyl-coa mutase, small subunitHMPREF9282_00296Not Available+1320 - 350680660.6
methylmalonyl-coa mutase large subunitHMPREF9282_00297Not Available+3506 - 568980774.4
lao/ao transport system atpaseHMPREF9282_00298Not Available+5694 - 685742602.4
hypothetical proteinHMPREF9282_00299Not Available+6969 - 729512626.8
hypothetical proteinHMPREF9282_00300Not Available-7650 - 817120420.2
hypothetical proteinHMPREF9282_00301Not Available-8197 - 907232112.7
hypothetical proteinHMPREF9282_00302Not Available-9053 - 970023522.5
hypothetical proteinHMPREF9282_00303Not Available-9738 - 1130057307.3
hypothetical proteinHMPREF9282_00304Not Available-11456 - 1228029716.3
hypothetical proteinHMPREF9282_00305Not Available-12280 - 1321834599.6

Displaying genes 1 – 10 of 1831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

339 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 339 metabolites