Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88
Gene Summary
Adenine Count
39686 bp
Thymine Count
36448 bp
Guanine Count
43961 bp
Cytosine Count
40478 bp
Genome Length
160573 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator repa | UMNK88_RS26995 | Not Available | + | 455 - 1486 | 40244.5 |
| hypothetical protein | UMNK88_RS27000 | Not Available | - | 2555 - 3064 | 19884.3 |
| proq/fino family protein | UMNK88_RS27005 | Not Available | - | 3120 - 3722 | 22452.0 |
| protein yaga | UMNK88_RS27010 | Not Available | + | 4076 - 5422 | 51398.8 |
| ash family protein | UMNK88_RS27015 | Not Available | + | 5701 - 7580 | 69919.9 |
| colicin 1a immunity protein | UMNK88_RS27025 | Not Available | - | 7602 - 7937 | 13283.5 |
| duf6404 family protein | UMNK88_RS27030 | Not Available | + | 8066 - 8413 | 13286.6 |
| hypothetical protein | UMNK88_RS27035 | Not Available | - | 8433 - 9023 | 21484.9 |
| hypothetical protein | UMNK88_RS27040 | Not Available | - | 9023 - 9280 | 10011.8 |
| hypothetical protein | UMNK88_RS27045 | Not Available | + | 9952 - 10221 | 10202.0 |
Pathways
12367 pathways






