Escherichia coli UMNK88

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli UMNK88 is a microorganism that belongs to the E. coli species, a prominent and well-studied bacterium. According to the Microbe Directory, this strain has a temperature preference category of "mesophilic", meaning it thrives in moderate temperatures ranging from 20 to 40°C. E. coli UMNK88 is a chemo-heterotroph, able to metabolize organic compounds as its energy source, as it is a facultative anaerobe, meaning it can grow both in the presence and absence of oxygen. Its energy production is primarily achieved through the breakdown of glucose and other organic molecules. E. coli UMNK88 is a Gram-negative bacterium, with an outer membrane consisting of lipopolysaccharides, which provides an additional layer of protection against antibiotics and other substances. Its shape is typical of E. coli, being a rod-shaped bacterium, with a specific length and width. It is found in the human gastrointestinal tract, as well as other body sites such as the urinary tract, respiratory tract, and skin. In terms of oxygen preference, E. coli UMNK88 is a facultative anaerobe, able to grow in both aerobic and anaerobic conditions. This microbe is one of the most well-studied bacteria in the world, with a wealth of knowledge on its genetic makeup, physiology, and behavior. E. coli UMNK88 is a key model organism for understanding the physiology and biochemistry of bacteria, and has been used extensively in scientific research, particularly in the fields of molecular biology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainUMNK88

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli UMNK88
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1278898 bp

Thymine Count

1276810 bp

Guanine Count

1315412 bp

Cytosine Count

1315286 bp

Genome Length

5186416 bp

Protein-coding Genes

4564 genes

Non-Coding Genes

672 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
plasmid replication initiator repaUMNK88_RS26995Not Available+455 - 148640244.5
hypothetical proteinUMNK88_RS27000Not Available-2555 - 306419884.3
proq/fino family proteinUMNK88_RS27005Not Available-3120 - 372222452.0
protein yagaUMNK88_RS27010Not Available+4076 - 542251398.8
ash family proteinUMNK88_RS27015Not Available+5701 - 758069919.9
colicin 1a immunity proteinUMNK88_RS27025Not Available-7602 - 793713283.5
duf6404 family proteinUMNK88_RS27030Not Available+8066 - 841313286.6
hypothetical proteinUMNK88_RS27035Not Available-8433 - 902321484.9
hypothetical proteinUMNK88_RS27040Not Available-9023 - 928010011.8
hypothetical proteinUMNK88_RS27045Not Available+9952 - 1022110202.0

Displaying genes 1 – 10 of 5817 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites