Rickettsia peacockii str. Rustic

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rocky Mountain spotted fever (RMSF) was first recognized in the early 1900s as being due to R. rickettsii in Rocky Mountain wood ticks (Demacentor andersoni). Transmission to humans occurs principally through bites of infected ticks. Interestingly, in the Bitterroot Valley in western Montana almost all cases of RMSF are due to ticks collected on the west side; ticks on the east side of the valley, while infected with rickettsiae, do not cause disease in man. R. peacockii seems only to occur in ovarian tissues of D.andersoni; male ticks have not been seen to be infected. R.peacockii does not make a functional ompA, which may be a reason for its endosymbiotic nature in ticks (R.rickettsii is pathogenic in ticks). It is hypothesized that a high prevalence of R. peacockii in tick ovaries might interfere with maintenance and transmission of R. rickettsii. Strain Rustic (also known as DAE100R) was isolated from Rustic, Colorado (adapted from PubMed 9103635 and 15528527). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia peacockii
StrainRustic

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Rickettsia peacockii str. Rustic
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Dermacentor andersoni
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Rickettsia peacockii str. Rustic


Gene Summary

Adenine Count

432581 bp

Thymine Count

436364 bp

Guanine Count

207927 bp

Cytosine Count

211620 bp

Genome Length

1288492 bp

Protein-coding Genes

1437 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinRPR_RS07690Not Available-149 - 3979446.62
division plane positioning atpase mipzRPR_RS07695Not Available+697 - 133224051.9
hypothetical proteinRPR_RS07700Not Available+1335 - 15839274.45
hypothetical proteinRPR_RS07705Not Available+1598 - 202316186.8
hypothetical proteinRPR_RS07710Not Available+2497 - 278411069.4
dnaa n-terminal domain-containing proteinRPR_RS07715Not Available+2771 - 511089040.0
n-6 dna methylaseRPR_RS07720Not Available+5154 - 629943939.1
hypothetical proteinRPR_RS09390Not Available+6317 - 65087331.8
is481-like element isrpe1 family transposaseRPR_RS07725Not Available+6542 - 763641684.7
acetyltransferaseRPR_RS07730Not Available-7673 - 829022676.6

Displaying genes 1 – 10 of 1510 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

500 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm00016962-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2Chemical structure of 2-heptyl-3-hydroxy-4(1H)-quinoloneNot available
Average259.349Da
Monoisotopic259.15722892Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 500 metabolites