Rickettsia rickettsii str. Sheila Smith

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia rickettsii str. Sheila Smith is a Gram-negative, rod-shaped bacterium that is nonsporulating and exhibits aerobic metabolism. This strain thrives optimally at 37.0°C, a temperature that aligns with the typical physiological conditions of its host-associated habitat. As a member of the Rickettsiaceae family, R. rickettsii is part of a group of obligate intracellular pathogens that require living hosts for growth and reproduction. The nonsporulating nature of this strain indicates a reliance on host environments for survival, which is characteristic of many rickettsial species. The aerobic requirement suggests that R. rickettsii str. Sheila Smith utilizes molecular oxygen for its metabolic processes, potentially influencing its interactions with host cells and the surrounding microbiome. The specific ecological niche of this strain underscores its adaptation to living within eukaryotic cells, where it may exploit host cellular machinery for its replication and survival. Understanding these traits provides insights into the physiological adaptations that enable Rickettsia rickettsii str. Sheila Smith to persist in host-associated environments, highlighting the intricate relationship between this bacterium and its hosts in the broader context of microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia rickettsii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Rickettsia rickettsii str. Sheila Smith
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia rickettsii str. Sheila Smith

Accession NumberNC_009882.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1401 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyruvate, water dikinase regulatory proteinA1G_RS00005Not Available+1 - 82231651.4
thioredoxinA1G_RS00010Not Available+1082 - 139911995.6
abc transporter atp-binding proteinA1G_RS00015Not Available+1409 - 215827716.7
abc transporter permeaseA1G_RS00020Not Available+2159 - 293529910.0
fad-dependent oxidoreductaseA1G_RS00025Not Available+2932 - 6033118220.0
type ii toxin-antitoxin system pemk/mazf family toxinA1G_RS00030Not Available-6077 - 63168958.82
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseA1G_RS00035Not Available-6443 - 723728335.2
3-hydroxyacyl-acp dehydratase fabzA1G_RS00040Not Available-7244 - 768116291.1
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseA1G_RS00045Not Available-7877 - 891436796.7
patatin-like phospholipase family proteinA1G_RS08855Not Available+9612 - 998614288.1

Displaying genes 1 – 10 of 1442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

24 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da

Displaying 1–10 of 24 metabolites