Bacteroides sp. 9_1_42FAA

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. 9_1_42FAA is a Gram-negative, rod-shaped bacterium that thrives optimally at mesophilic temperatures (20-45°C), classified as a heterotrophic, obligate anaerobe. This microbe belongs to the Bacteroides genus, which is commonly found in the gastrointestinal tracts of various organisms, playing a crucial role in the breakdown of complex carbohydrates and maintaining gut health. As a Gram-negative organism, Bacteroides sp. 9_1_42FAA possesses a thin peptidoglycan layer surrounded by an outer membrane that contains lipopolysaccharides, contributing to its pathogenic potential and interaction with the host immune system. The rod shape of this bacterium is typical for many species in the Bacteroidetes phylum, facilitating its movement within the viscous environment of the gut. Its mesophilic temperature preference indicates that it thrives in moderate heat, ideal for colonization in warm-blooded hosts. Being a heterotroph, Bacteroides sp. 9_1_42FAA derives its energy from organic compounds, primarily through the fermentation of carbohydrates present in the diet. Its obligate anaerobic nature necessitates an environment devoid of oxygen, which is characteristic of the gut microbiome where it contributes to metabolic processes without the interference of oxygen. This bacterium plays a vital role in the fermentation of dietary fibers, producing short-chain fatty acids that are beneficial for intestinal health and may influence host metabolism. Moreover, research has shown that Bacteroides sp. 9_1_42FAA can adapt to various dietary conditions, affecting its community dynamics within the gut microbiome. This adaptability may have implications for understanding the relationship between diet, gut health, and the overall immune response, providing insights into the potential for therapeutic interventions targeting the gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. 9_1_42FAA
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. 9_1_42FAA


Gene Summary

Adenine Count

1653441 bp

Thymine Count

1584376 bp

Guanine Count

1131442 bp

Cytosine Count

1245009 bp

Genome Length

5614268 bp

Protein-coding Genes

4532 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+243 - 352Not Available
23s ribosomal rnaNot AvailableNot Available+433 - 3318Not Available
hypothetical proteinBSBG_04825Not Available+830 - 9494370.34
hypothetical proteinBSBG_03987Not Available+1137 - 182926350.0
hypothetical proteinBSBG_03988Not Available+1840 - 213010805.2
malate dehydrogenaseBSBG_03989B9DK67+2374 - 337536008.4
dna primaseBSBG_03990Q5HNY6+3453 - 552878739.4
16s ribosomal rnaNot AvailableNot Available+3749 - 5269Not Available
gtp cyclohydrolase 1BSBG_03991Q5L925-5544 - 613722694.7
hypothetical proteinBSBG_03992Not Available-6142 - 660017078.7

Displaying genes 1 – 10 of 4616 in total

Metabolites

254 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 254 metabolites