Sphingobium sp. MI1205

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MI1205
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MI1205

NZ_CP005193.1NZ_CP005189.1NZ_CP005190.1NZ_CP005191.1NZ_CP005188.1NZ_CP005192.1

Gene Summary

Adenine Count

17255 bp

Thymine Count

17239 bp

Guanine Count

27031 bp

Cytosine Count

26849 bp

Genome Length

88374 bp

Protein-coding Genes

104 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
replication initiator protein aK663_RS22760P60119+1 - 111342000.3
ribbon-helix-helix domain-containing proteinK663_RS22765Not Available-1177 - 149110868.0
para family partition atpaseK663_RS22770Not Available-1488 - 214122798.1
sprt-like domain-containing proteinK663_RS22775Not Available-2268 - 290922584.1
type ii toxin-antitoxin system relb/dinj family antitoxinK663_RS22780A0A140ND86+3324 - 360510314.4
type ii toxin-antitoxin system yafq family toxinK663_RS22785Not Available+3574 - 389412212.5
helix-turn-helix domain-containing proteinK663_RS22790Not Available+3930 - 434914875.6
dna-binding transcriptional regulatorK663_RS22795Not Available+4401 - 45625947.41
hypothetical proteinK663_RS22800Not Available+4576 - 47827667.98
hypothetical proteinK663_RS24725Not Available+4769 - 506510456.6

Displaying genes 1 – 10 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0001283(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-dieneC6H4Cl4Chemical structure of (3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-dieneNot available
Average217.9Da
Monoisotopic215.9067109Da
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–5 of 5 metabolites