Bacteroides xylanisolvens

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides xylanisolvens is a gram-negative, rod-shaped microbe that thrives in mesophilic temperatures, classified as a chemoheterotroph, and can be found in various body sites across different species, including the gastrointestinal tract, skin, and oral cavity. As an obligate anaerobe, Bacteroides xylanisolvens requires the absence of oxygen to survive and multiply. The gram-negative characteristic indicates that the microbe's cell wall contains an outer lipid bilayer, providing it with a unique set of interactions with its environment. Its rod-shaped morphology allows for efficient movement and colonization of surfaces. The mesophilic temperature preference suggests that Bacteroides xylanisolvens is adapted to moderate temperatures, typical of many animal hosts. As a chemoheterotroph, the microbe relies on external sources of organic compounds for energy and carbon. The ability to inhabit various body sites across different species highlights its adaptability and potential for symbiotic relationships. The obligate anaerobic nature of Bacteroides xylanisolvens limits its habitat to low-oxygen environments, such as the gut. Bacteroides xylanisolvens plays a significant role in the breakdown of complex polysaccharides, such as xylan, and has been implicated in the degradation of plant biomass, making it a key player in the cycling of nutrients in various ecosystems, and its presence has been detected in environments ranging from the human gut to soil and sediment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides xylanisolvens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides xylanisolvens


Gene Summary

Adenine Count

1805838 bp

Thymine Count

1812411 bp

Guanine Count

1298370 bp

Cytosine Count

1331105 bp

Genome Length

6247991 bp

Protein-coding Genes

4923 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf3826 domain-containing proteinDWW25_00665Not Available-188910 - 19087473718.4
glycoside hydrolase family 28 proteinDWW25_00670Not Available-190971 - 19232349868.3
hydrolaseDWW25_00675Not Available-192524 - 195265103362.0
hypothetical proteinDWW25_00680Not Available+195285 - 1954707194.93
six-hairpin glycosidaseDWW25_00685Not Available-195564 - 198884126845.0
arabinosidaseDWW25_00690Not Available-198916 - 19976132396.2
duf3826 domain-containing proteinDWW25_00695Not Available-200045 - 20071325418.5
polysaccharide lyaseDWW25_00700Not Available-200716 - 20245564902.4
hypothetical proteinDWW25_00705Not Available-202782 - 20363630217.7
ragb/susd family nutrient uptake outer membrane proteinDWW25_00710Not Available-204084 - 20627681600.1

Displaying genes 131 – 140 of 14522 in total

Metabolites

211 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 1–10 of 211 metabolites