Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | E1J06_18530 | Not Available | Negative | 4297518 - 4300466 | 108893.0 |
| helix-turn-helix domain-containing protein | E1J06_18535 | Not Available | Negative | 4300678 - 4303518 | 107993.0 |
| beta-galactosidase | E1J06_18540 | Not Available | Negative | 4303672 - 4306020 | 88354.7 |
| alpha-l-arabinofuranosidase | E1J06_18545 | Not Available | Negative | 4306037 - 4308535 | 92445.5 |
| glycoside hydrolase | E1J06_18550 | Not Available | Negative | 4308563 - 4310506 | 73310.7 |
| alpha-l-rhamnosidase | E1J06_18555 | Not Available | Negative | 4310760 - 4314278 | 132137.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_18560 | Not Available | Negative | 4314405 - 4315877 | 54813.8 |
| susc/raga family tonb-linked outer membrane protein | E1J06_18565 | Not Available | Negative | 4315899 - 4319285 | 124090.0 |
| duf4974 domain-containing protein | E1J06_18570 | Not Available | Negative | 4319436 - 4320380 | 36164.8 |
| rna polymerase sigma-70 factor | E1J06_18575 | Not Available | Negative | 4320454 - 4321014 | 22126.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

