Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | E1J06_17595 | Not Available | - | 4066317 - 4067951 | 62073.9 |
| putative transporter | E1J06_17600 | Not Available | - | 4068063 - 4069733 | 60143.8 |
| methylmalonyl-coa mutase small subunit | E1J06_17605 | Not Available | + | 4070020 - 4071930 | 70629.6 |
| methylmalonyl-coa mutase | E1J06_17610 | Not Available | + | 4071940 - 4074090 | 79110.7 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_17615 | Not Available | - | 4074415 - 4075905 | 55950.7 |
| tonb-dependent receptor | E1J06_17620 | Not Available | - | 4075920 - 4079165 | 119687.0 |
| duf1232 domain-containing protein | E1J06_17625 | Not Available | - | 4079720 - 4080082 | 14004.2 |
| hamp domain-containing histidine kinase | E1J06_17635 | Not Available | + | 4082707 - 4084203 | 56725.8 |
| mechanosensitive ion channel | E1J06_17640 | Not Available | - | 4084320 - 4085513 | 45208.8 |
| multidrug efflux rnd transporter permease subunit | E1J06_17645 | Not Available | - | 4085655 - 4088771 | 112542.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

