Rhodococcus erythropolis PR4

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus erythropolis PR4 is a Gram-positive, rod-shaped bacterium that thrives optimally at mesophilic temperatures and functions as a chemoheterotroph. This versatile microbe is often found in diverse environments, including soil, water, and even contaminated sites, where it utilizes organic substances as a source of carbon and energy. As a facultative anaerobe, R. erythropolis PR4 can grow in the presence or absence of oxygen, although it prefers aerobic conditions for optimal metabolism. The Gram-positive nature of R. erythropolis PR4 is characterized by its thick peptidoglycan layer, which provides structural integrity and resistance to certain antibiotics. The rod shape of this bacterium contributes to its efficient motility and allows it to readily colonize various substrates. It is categorized as a mesophile, indicating its preference for moderate temperature ranges, typically between 20-45°C, making it well-adapted to terrestrial environments. As a chemoheterotroph, R. erythropolis PR4 derives energy from the oxidation of organic compounds, which allows it to thrive in nutrient-rich environments. Its facultative anaerobic capabilities enable it to switch metabolic pathways depending on the oxygen availability, providing it an advantage in fluctuating habitats. Rhodococcus erythropolis PR4 is especially notable for its bioremediation potential, as it can degrade a variety of environmental pollutants, including hydrocarbons and heavy metals. This ability makes it a focal point of research in environmental microbiology, particularly for applications in cleaning up oil spills and other forms of contamination. Additionally, it has been studied for its role in industrial biotechnology, where it can be used to produce valuable compounds through bioconversion processes. With its unique metabolic versatility and ecological significance, R. erythropolis PR4 exemplifies a remarkable microbe capable of adapting to and thriving in diverse environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus erythropolis
StrainPR4

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Rhodococcus erythropolis PR4


Gene Summary

Adenine Count

51637 bp

Thymine Count

51819 bp

Guanine Count

84675 bp

Cytosine Count

83446 bp

Genome Length

271577 bp

Protein-coding Genes

293 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sigma factor-like helix-turn-helix dna-binding proteinRER_RS01400Not Available+65 - 45414043.6
glutaredoxin-like protein nrdhRER_RS01405Not Available+491 - 7188163.73
dnab-like helicase n-terminal domain-containing proteinRER_RS01410Not Available+760 - 128719102.6
hypothetical proteinRER_RS33335Not Available+1284 - 14576201.93
hypothetical proteinRER_RS01415Not Available+1547 - 247334568.9
helix-turn-helix domain-containing proteinRER_RS32630Not Available-2549 - 28189931.93
hypothetical proteinRER_RS01425Not Available-2843 - 314210663.4
hypothetical proteinRER_RS01430Not Available+3303 - 371915048.3
hypothetical proteinRER_RS01435Not Available+3709 - 429321119.9
membrane proteinRER_RS01440Not Available+4319 - 45227197.09

Displaying genes 1 – 10 of 6525 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites