Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | MG417-CF17 (=DSM 44213) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flotillin family protein | AJAP_RS32295 | Not Available | - | 7026899 - 7028845 | 72096.3 |
| hypothetical protein | AJAP_RS32300 | Not Available | - | 7028926 - 7029510 | 20353.6 |
| hypothetical protein | AJAP_RS32305 | Not Available | + | 7029788 - 7030225 | 16595.3 |
| (fe-s)-binding protein | AJAP_RS32310 | Not Available | + | 7030249 - 7032348 | 77567.7 |
| metal abc transporter substrate-binding protein | AJAP_RS32315 | Not Available | + | 7032397 - 7033311 | 32120.2 |
| metal abc transporter atp-binding protein | AJAP_RS32320 | Not Available | + | 7033308 - 7034051 | 26448.0 |
| metal abc transporter permease | AJAP_RS32325 | Not Available | + | 7034048 - 7034917 | 30400.2 |
| abc transporter atp-binding protein | AJAP_RS32330 | Not Available | + | 7034990 - 7035805 | 28840.5 |
| iron-siderophore abc transporter substrate-binding protein | AJAP_RS32335 | Not Available | + | 7035823 - 7036800 | 34019.6 |
| iron abc transporter permease | AJAP_RS32340 | Not Available | + | 7036800 - 7038815 | 67424.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.