Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | MG417-CF17 (=DSM 44213) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
13819 bp
Thymine Count
15581 bp
Guanine Count
32490 bp
Cytosine Count
30649 bp
Genome Length
92539 bp
Protein-coding Genes
132 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Von willebrand factor type a-like domain containing protein | AJAP_RS22675 | Not Available | - | 4927172 - 4931176 | 135922.0 |
| zinc ribbon domain-containing protein | AJAP_RS22680 | Not Available | - | 4931188 - 4932162 | 35332.3 |
| phage tail protein | AJAP_RS22685 | Not Available | - | 4932166 - 4932705 | 19509.2 |
| Baseplate assembly protein | AJAP_RS22690 | Not Available | - | 4932702 - 4934663 | 71015.1 |
| Baseplate wedge subunit | AJAP_RS22695 | Not Available | - | 4934663 - 4935073 | 14882.8 |
| Baseplate puncturing device | AJAP_RS22700 | Not Available | - | 4935075 - 4935356 | 8796.04 |
| Tail protein | AJAP_RS22705 | Not Available | - | 4935539 - 4937359 | 63547.5 |
| lysm peptidoglycan-binding domain-containing protein | AJAP_RS22710 | Not Available | - | 4937352 - 4938116 | 27243.3 |
| phage tail protein | AJAP_RS22715 | Not Available | - | 4938119 - 4938565 | 15939.0 |
| Attl | Not Available | Not Available | + | 5958370 - 5958381 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.