Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | MG417-CF17 (=DSM 44213) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS32240 | Not Available | - | 7011180 - 7011701 | 19372.4 |
| substrate-binding and vwa domain-containing protein | AJAP_RS32245 | Not Available | - | 7011703 - 7013457 | 64425.5 |
| p-loop ntpase fold protein | AJAP_RS32250 | Not Available | - | 7013494 - 7016115 | 95591.8 |
| snapalysin family zinc-dependent metalloprotease | AJAP_RS32255 | Not Available | + | 7016254 - 7016805 | 18975.6 |
| ferredoxin | AJAP_RS32260 | Not Available | - | 7016855 - 7017034 | 6329.53 |
| cytochrome p450 | AJAP_RS32265 | Not Available | - | 7017040 - 7018242 | 43871.9 |
| helix-turn-helix domain-containing protein | AJAP_RS32270 | Not Available | + | 7018405 - 7019346 | 34187.9 |
| is5 family transposase | AJAP_RS43245 | Not Available | - | 7019522 - 7020342 | 31392.2 |
| hnh endonuclease signature motif containing protein | AJAP_RS32285 | Not Available | - | 7020510 - 7021733 | 44055.8 |
| dna repair atpase | AJAP_RS32290 | Not Available | - | 7022019 - 7026902 | 179579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.