Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sco3242 family prenyltransferase | AJAP_RS32140 | Not Available | - | 6989643 - 6990491 | 27850.9 |
| inositol-3-phosphate synthase | AJAP_RS32145 | Not Available | - | 6990488 - 6991645 | 40071.4 |
| gfo/idh/moca family protein | AJAP_RS32150 | Not Available | - | 6991755 - 6992924 | 41828.4 |
| substrate-binding domain-containing protein | AJAP_RS32155 | Not Available | - | 6992967 - 6994019 | 36782.4 |
| abc transporter permease | AJAP_RS32160 | Not Available | - | 6994042 - 6995019 | 34015.7 |
| sugar abc transporter atp-binding protein | AJAP_RS32165 | Not Available | - | 6995055 - 6996557 | 53328.3 |
| rok family protein | AJAP_RS32170 | Not Available | - | 6996554 - 6997771 | 41355.7 |
| rok family transcriptional regulator | AJAP_RS32175 | Not Available | - | 6998115 - 6999317 | 41232.7 |
| dha2 family efflux mfs transporter permease subunit | AJAP_RS32180 | Not Available | - | 6999410 - 7000777 | 46989.0 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | AJAP_RS32185 | Not Available | + | 7000870 - 7001481 | 22340.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.