Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | MG417-CF17 (=DSM 44213) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase family protein | AJAP_RS10125 | Not Available | + | 2073471 - 2074994 | 53622.7 |
| trypsin-like serine protease | AJAP_RS10130 | Not Available | - | 2075055 - 2076506 | 49236.9 |
| peroxide stress protein yaaa | AJAP_RS10135 | Not Available | - | 2076594 - 2077349 | 26455.9 |
| gnat family n-acetyltransferase | AJAP_RS10140 | Not Available | + | 2077409 - 2078377 | 35714.1 |
| hypothetical protein | AJAP_RS10145 | Not Available | + | 2078451 - 2079386 | 34391.1 |
| is110 family transposase | AJAP_RS10150 | Not Available | - | 2079898 - 2080986 | 38372.9 |
| 2-hydroxyacid dehydrogenase | AJAP_RS10155 | Not Available | - | 2081272 - 2082177 | 31886.3 |
| voc family protein | AJAP_RS10160 | Not Available | - | 2082206 - 2082562 | 13090.6 |
| proline--trna ligase | AJAP_RS10165 | Not Available | + | 2082689 - 2084437 | 63696.6 |
| hypothetical protein | AJAP_RS10170 | Not Available | + | 2084437 - 2085363 | 31833.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.