Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Site-specific recombinase for integration and excision | SAMN02910353_01501 | Not Available | - | 1725121 - 1726677 | 60047.7 |
| Site-specific recombinase for integration and excision | SAMN02910353_01502 | Not Available | - | 1726674 - 1727066 | 14413.3 |
| Putative integrase | SAMN02910353_01503 | Not Available | - | 1727045 - 1728595 | 59589.1 |
| hypothetical protein | SAMN02910353_01504 | Not Available | - | 1728624 - 1728815 | 7394.76 |
| Hsp20 | SAMN02910353_01505 | Not Available | + | 1729131 - 1729574 | 16860.1 |
| Endolysin | SAMN02910353_01506 | Not Available | - | 1729648 - 1730823 | 43008.3 |
| Phage holin | SAMN02910353_01507 | Not Available | - | 1730816 - 1731244 | 15035.7 |
| hypothetical protein | SAMN02910353_01508 | Not Available | - | 1731241 - 1731912 | 24701.4 |
| Tail sheath protein | SAMN02910353_01509 | Not Available | - | 1731909 - 1732982 | 39931.5 |
| Tail protein | SAMN02910353_01510 | Not Available | - | 1732982 - 1734379 | 51636.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.