Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonide transport system substrate-binding protein | SAMN02910353_03085 | Not Available | - | 3524914 - 3526167 | 46917.2 |
| ggdef domain-containing protein, diguanylate cyclase (c-di-gmp synthetase) or its enzymatically inactive variants | SAMN02910353_03086 | Not Available | - | 3526187 - 3527659 | 54080.3 |
| arabinoxylan arabinofuranohydrolase | SAMN02910353_03087 | Not Available | - | 3527975 - 3529945 | 71030.6 |
| hypothetical protein | SAMN02910353_03088 | Not Available | + | 3529946 - 3530129 | 7206.81 |
| hypothetical protein | SAMN02910353_03089 | Not Available | - | 3530247 - 3530915 | 25123.3 |
| site-specific dna recombinase | SAMN02910353_03090 | Not Available | - | 3530864 - 3532039 | 45187.3 |
| trna(fmet)-specific endonuclease vapc | SAMN02910353_03091 | Not Available | - | 3532289 - 3532684 | 14551.5 |
| antitoxin vapb | SAMN02910353_03092 | Not Available | - | 3532681 - 3532923 | 9205.9 |
| hypothetical protein | SAMN02910353_03093 | Not Available | - | 3533000 - 3533164 | 6223.39 |
| serine protease inhibitor | SAMN02910353_03094 | Not Available | + | 3534082 - 3535560 | 54672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.