Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_03064 | Not Available | + | 3501831 - 3502022 | 6911.54 |
| hypothetical protein | SAMN02910353_03065 | Not Available | + | 3502027 - 3502251 | 8323.1 |
| hypothetical protein | SAMN02910353_03066 | Not Available | - | 3502560 - 3503321 | 27063.9 |
| site-specific dna recombinase | SAMN02910353_03067 | Not Available | - | 3503662 - 3505299 | 62963.1 |
| hypothetical protein | SAMN02910353_03068 | Not Available | - | 3505398 - 3505556 | 6130.21 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN02910353_03069 | Not Available | + | 3506417 - 3507817 | 52602.2 |
| atp-binding cassette, subfamily b | SAMN02910353_03070 | Not Available | - | 3508191 - 3510083 | 69495.5 |
| atp-binding cassette, subfamily b | SAMN02910353_03071 | Not Available | - | 3510083 - 3511810 | 63465.8 |
| hypoxanthine phosphoribosyltransferase | SAMN02910353_03072 | Not Available | + | 3512284 - 3512832 | 20342.7 |
| cellulose binding domain-containing protein | SAMN02910353_03073 | Not Available | - | 3512895 - 3515813 | 108357.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.