Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN02910353_03022 | Not Available | + | 3455805 - 3456995 | 42148.9 |
| histidine kinase | SAMN02910353_03023 | Not Available | + | 3457125 - 3458717 | 59391.1 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN02910353_03024 | Not Available | + | 3458836 - 3459408 | 20874.4 |
| hypothetical protein | SAMN02910353_03025 | Not Available | - | 3459883 - 3460218 | 12732.6 |
| penicillin-binding protein 1a | SAMN02910353_03026 | Not Available | + | 3460465 - 3463038 | 94814.5 |
| putative n6-adenine-specific dna methylase | SAMN02910353_03027 | Not Available | + | 3463183 - 3464298 | 41514.0 |
| comf family protein | SAMN02910353_03028 | Not Available | + | 3464298 - 3464978 | 24755.1 |
| c_gcaxxg_c_c family probable redox protein | SAMN02910353_03029 | Not Available | + | 3464975 - 3465439 | 17292.7 |
| zinc transport system substrate-binding protein | SAMN02910353_03030 | Not Available | + | 3465591 - 3466562 | 35528.1 |
| zinc transport system atp-binding protein | SAMN02910353_03031 | Not Available | + | 3466562 - 3467275 | 26296.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.