Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN02910353_02982 | Not Available | + | 3411617 - 3413374 | 66129.9 |
| integrase | SAMN02910353_02983 | Not Available | - | 3413819 - 3414904 | 40996.7 |
| hypothetical protein | SAMN02910353_02984 | Not Available | - | 3414986 - 3415213 | 8896.77 |
| hypothetical protein | SAMN02910353_02985 | Not Available | - | 3415250 - 3418342 | 115819.0 |
| hypothetical protein | SAMN02910353_02986 | Not Available | - | 3418557 - 3420401 | 70438.8 |
| sos response associated peptidase (srap) | SAMN02910353_02987 | Not Available | - | 3420647 - 3421297 | 24600.4 |
| type i restriction enzyme, r subunit | SAMN02910353_02988 | Not Available | - | 3421394 - 3422140 | 28998.8 |
| aaa domain-containing protein | SAMN02910353_02989 | Not Available | - | 3422141 - 3422581 | 16654.1 |
| hypothetical protein | SAMN02910353_02990 | Not Available | - | 3423660 - 3424442 | 30536.8 |
| spfh domain-band 7 family protein | SAMN02910353_02991 | Not Available | - | 3424551 - 3426146 | 57786.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.