Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase complex protein algi | SAMN02910353_00901 | Not Available | + | 1010739 - 1012142 | 52745.7 |
| sgnh hydrolase-like domain-containing protein, acetyltransferase algx | SAMN02910353_00902 | Not Available | + | 1012154 - 1013605 | 53289.4 |
| hypothetical protein | SAMN02910353_00903 | Not Available | + | 1013608 - 1014324 | 25692.4 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN02910353_00904 | Not Available | - | 1014414 - 1015409 | 36945.0 |
| membrane protein implicated in regulation of membrane protease activity | SAMN02910353_00905 | Not Available | - | 1015425 - 1015859 | 15362.0 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910353_00906 | Not Available | + | 1016265 - 1019003 | 101709.0 |
| hypothetical protein | SAMN02910353_00907 | Not Available | + | 1019296 - 1020390 | 40229.3 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN02910353_00908 | Not Available | + | 1020710 - 1021471 | 26578.0 |
| cu+-exporting atpase | SAMN02910353_00909 | Not Available | + | 1021482 - 1024001 | 93899.4 |
| transcriptional attenuator, lytr family | SAMN02910353_00910 | Not Available | + | 1024065 - 1025444 | 53176.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.