Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | SAMN02910353_00891 | Not Available | + | 998709 - 999704 | 38035.6 |
| dna primase | SAMN02910353_00892 | Not Available | + | 999711 - 1001462 | 65766.4 |
| rna polymerase primary sigma factor | SAMN02910353_00893 | Not Available | + | 1001543 - 1002625 | 40793.8 |
| gntr family transcriptional regulator | SAMN02910353_00894 | Not Available | + | 1002770 - 1003141 | 13772.7 |
| abc-2 type transport system atp-binding protein | SAMN02910353_00895 | Not Available | + | 1003144 - 1004028 | 33022.3 |
| hypothetical protein | SAMN02910353_00896 | Not Available | + | 1003997 - 1004725 | 26716.7 |
| abc-2 family transporter protein | SAMN02910353_00897 | Not Available | + | 1004738 - 1005508 | 27760.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN02910353_00898 | Not Available | + | 1005523 - 1007382 | 67929.8 |
| glucan-binding repeat-containing protein | SAMN02910353_00899 | Not Available | + | 1007787 - 1009967 | 79660.4 |
| hypothetical protein | SAMN02910353_00900 | Not Available | + | 1009983 - 1010723 | 25184.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.