Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00881 | Not Available | + | 991432 - 992619 | 45362.1 |
| hypothetical protein | SAMN02910353_00882 | Not Available | - | 992872 - 993867 | 36531.3 |
| elongation factor ts | SAMN02910353_00883 | Not Available | - | 993904 - 994824 | 33025.9 |
| small subunit ribosomal protein s2 | SAMN02910353_00884 | Not Available | - | 994946 - 995692 | 27316.1 |
| sporulation protein, ylmc/ymxh family | SAMN02910353_00885 | Not Available | - | 995851 - 996141 | 10693.9 |
| hypothetical protein | SAMN02910353_00886 | Not Available | - | 996203 - 996361 | 5394.6 |
| hypothetical protein | SAMN02910353_00887 | Not Available | - | 996468 - 996968 | 17448.9 |
| hypothetical protein | SAMN02910353_00888 | Not Available | - | 996968 - 997264 | 10944.0 |
| large subunit ribosomal protein l31 | SAMN02910353_00889 | Not Available | + | 997486 - 997689 | 7737.5 |
| uncharacterized protein, yigz family | SAMN02910353_00890 | Not Available | + | 997874 - 998512 | 23256.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.