Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease-3 family protein | SAMN02910353_00871 | Not Available | - | 981354 - 981785 | 16102.3 |
| gtp-binding protein | SAMN02910353_00872 | Not Available | - | 981769 - 983046 | 46291.1 |
| large subunit ribosomal protein l27 | SAMN02910353_00873 | Not Available | - | 983255 - 983536 | 10262.3 |
| hypothetical protein | SAMN02910353_00874 | Not Available | - | 983541 - 983855 | 11459.8 |
| large subunit ribosomal protein l21 | SAMN02910353_00875 | Not Available | - | 983852 - 984163 | 11219.5 |
| moxr-like atpase | SAMN02910353_00876 | Not Available | + | 984510 - 985442 | 34407.6 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN02910353_00877 | Not Available | + | 985449 - 986669 | 44781.2 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN02910353_00878 | Not Available | + | 986673 - 988949 | 87067.6 |
| hypothetical protein | SAMN02910353_00879 | Not Available | + | 988952 - 990373 | 52017.0 |
| ribosomal protein l11 methyltransferase | SAMN02910353_00880 | Not Available | + | 990389 - 991354 | 35726.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.