Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sortase a | SAMN02910353_00840 | Not Available | + | 945645 - 946517 | 32130.5 |
| hypothetical protein | SAMN02910353_00841 | Not Available | + | 946531 - 947595 | 39134.8 |
| sortase a | SAMN02910353_00842 | Not Available | + | 947588 - 948232 | 23282.5 |
| transcriptional regulator, tetr family | SAMN02910353_00843 | Not Available | + | 948691 - 949338 | 24763.2 |
| alpha-galactosidase | SAMN02910353_00844 | Not Available | + | 949358 - 950998 | 61877.9 |
| glycoside hydrolase family 44 | SAMN02910353_00845 | Not Available | - | 951088 - 953535 | 87730.2 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN02910353_00846 | Not Available | - | 953619 - 954473 | 32138.5 |
| leucine rich repeat-containing protein | SAMN02910353_00847 | Not Available | - | 954812 - 956410 | 57545.6 |
| abc-2 type transport system permease protein | SAMN02910353_00848 | Not Available | - | 956595 - 957398 | 31178.8 |
| abc-2 type transport system permease protein | SAMN02910353_00849 | Not Available | - | 957403 - 958206 | 30349.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.