Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN02910353_00809 | Not Available | - | 902503 - 904611 | 75975.8 |
| glycerophosphoryl diester phosphodiesterase | SAMN02910353_00810 | Not Available | + | 904921 - 906747 | 68513.2 |
| stage v sporulation protein s | SAMN02910353_00811 | Not Available | - | 906953 - 907213 | 8913.9 |
| hypothetical protein | SAMN02910353_00812 | Not Available | - | 907401 - 908171 | 27752.3 |
| polyphosphate kinase | SAMN02910353_00813 | Not Available | + | 908416 - 910668 | 85354.2 |
| uridine kinase | SAMN02910353_00814 | Not Available | + | 910823 - 911743 | 35356.4 |
| hypothetical protein | SAMN02910353_00815 | Not Available | + | 911975 - 912286 | 10999.0 |
| hypothetical protein | SAMN02910353_00816 | Not Available | + | 912288 - 912977 | 24638.9 |
| prolyl-trna synthetase | SAMN02910353_00817 | Not Available | - | 913021 - 914460 | 54045.4 |
| ig-like domain (group 3) | SAMN02910353_00818 | Not Available | - | 914665 - 917295 | 94731.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.