Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00003 | Not Available | - | 3977 - 5563 | 61741.6 |
| site-specific recombinase xerd | SAMN02910353_00004 | Not Available | + | 5976 - 7136 | 43150.8 |
| phage/plasmid primase, p4 family, c-terminal domain-containing protein | SAMN02910353_00005 | Not Available | + | 7223 - 8584 | 52182.3 |
| hypothetical protein | SAMN02910353_00006 | Not Available | + | 8764 - 9105 | 12728.2 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN02910353_00007 | Not Available | + | 9096 - 10349 | 47567.3 |
| Trna-met | Not Available | Not Available | + | 10653 - 10729 | Not Available |
| hypothetical protein | SAMN02910353_00009 | Not Available | - | 11041 - 11550 | 19560.1 |
| hypothetical protein | SAMN02910353_00010 | Not Available | - | 11694 - 13211 | 56804.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_00011 | Not Available | - | 13189 - 13719 | 20761.9 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 14822 - 14938 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.