Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN02910353_00799 | Not Available | - | 887845 - 888633 | 30300.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN02910353_00800 | Not Available | - | 888663 - 891080 | 92331.8 |
| hypothetical protein | SAMN02910353_00801 | Not Available | - | 891097 - 891588 | 18778.8 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN02910353_00802 | Not Available | + | 891819 - 894059 | 81616.5 |
| double zinc ribbon | SAMN02910353_00803 | Not Available | - | 894143 - 894790 | 23194.4 |
| hypothetical protein | SAMN02910353_00804 | Not Available | + | 894916 - 895248 | 11623.2 |
| transcriptional regulator, tetr family | SAMN02910353_00805 | Not Available | - | 895293 - 895910 | 23435.5 |
| hypothetical protein | SAMN02910353_00806 | Not Available | + | 896161 - 898272 | 76934.4 |
| putative membrane protein | SAMN02910353_00807 | Not Available | + | 898347 - 901070 | 91204.5 |
| leucine rich repeat-containing protein | SAMN02910353_00808 | Not Available | - | 901143 - 902528 | 49818.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.