Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f-type h+-transporting atpase subunit alpha | SAMN02910353_00789 | Not Available | + | 877095 - 879119 | 74264.9 |
| f-type h+-transporting atpase subunit gamma | SAMN02910353_00790 | Not Available | + | 879131 - 880036 | 34565.7 |
| uncharacterized protein, pyridoxamine 5'-phosphate oxidase (pnpox-like) family | SAMN02910353_00791 | Not Available | + | 880313 - 880705 | 14190.0 |
| f-type h+-transporting atpase subunit beta | SAMN02910353_00792 | Not Available | + | 880733 - 882130 | 51249.8 |
| f-type h+-transporting atpase subunit epsilon | SAMN02910353_00793 | Not Available | + | 882135 - 882545 | 15590.8 |
| preprotein translocase subunit secd | SAMN02910353_00794 | Not Available | + | 882826 - 884235 | 49608.6 |
| preprotein translocase subunit secf | SAMN02910353_00795 | Not Available | + | 884232 - 885206 | 35293.1 |
| hypothetical protein | SAMN02910353_00796 | Not Available | + | 885624 - 886406 | 28734.8 |
| cysteine-rich cpcc | SAMN02910353_00797 | Not Available | - | 886449 - 887087 | 24706.1 |
| abc-2 type transport system atp-binding protein | SAMN02910353_00798 | Not Available | - | 887097 - 887834 | 27114.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.