Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00779 | Not Available | + | 870912 - 871166 | 9311.07 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN02910353_00780 | Not Available | + | 871225 - 872370 | 42971.9 |
| hypothetical protein | SAMN02910353_00781 | Not Available | + | 872371 - 872643 | 10564.3 |
| rhamnosyl/mannosyltransferase | SAMN02910353_00782 | Not Available | + | 872643 - 873764 | 42050.3 |
| gdpmannose 4,6-dehydratase | SAMN02910353_00783 | Not Available | + | 873777 - 874739 | 34914.1 |
| hypothetical protein | SAMN02910353_00784 | Not Available | + | 874767 - 875105 | 12577.0 |
| f-type h+-transporting atpase subunit a | SAMN02910353_00785 | Not Available | + | 875313 - 876050 | 26930.9 |
| f-type h+-transporting atpase subunit c | SAMN02910353_00786 | Not Available | + | 876053 - 876280 | 7338.33 |
| f-type h+-transporting atpase subunit c | SAMN02910353_00787 | Not Available | + | 876348 - 876575 | 7338.33 |
| f-type h+-transporting atpase subunit b | SAMN02910353_00788 | Not Available | + | 876610 - 877098 | 18614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.