Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00769 | Not Available | - | 859654 - 859827 | 6217.46 |
| molecular chaperone dnak | SAMN02910353_00770 | Not Available | - | 859831 - 861681 | 65983.6 |
| molecular chaperone grpe | SAMN02910353_00771 | Not Available | - | 861805 - 862383 | 21577.9 |
| heat-inducible transcription repressor hrca | SAMN02910353_00772 | Not Available | - | 862400 - 863449 | 38661.3 |
| acylphosphatase | SAMN02910353_00773 | Not Available | + | 863684 - 863956 | 10236.2 |
| phosphoglucosamine mutase | SAMN02910353_00774 | Not Available | + | 864090 - 865475 | 50339.8 |
| glycosyl hydrolases family 43 | SAMN02910353_00775 | Not Available | + | 865572 - 867071 | 55887.9 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | SAMN02910353_00776 | Not Available | + | 867311 - 868693 | 53053.0 |
| mannose-1-phosphate guanylyltransferase | SAMN02910353_00777 | Not Available | + | 868690 - 869754 | 39590.6 |
| gdpmannose 4,6-dehydratase | SAMN02910353_00778 | Not Available | + | 869873 - 870910 | 39137.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.