Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00759 | Not Available | + | 850428 - 851594 | 43522.1 |
| hypothetical protein | SAMN02910353_00760 | Not Available | + | 851729 - 852544 | 30018.3 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN02910353_00761 | Not Available | + | 852578 - 854893 | 85920.1 |
| hypothetical protein | SAMN02910353_00762 | Not Available | + | 854890 - 855555 | 23905.0 |
| protein of unknown function | SAMN02910353_00763 | Not Available | + | 855673 - 856398 | 23615.8 |
| protein of unknown function | SAMN02910353_00764 | Not Available | + | 856412 - 856813 | 14785.1 |
| hypothetical protein | SAMN02910353_00765 | Not Available | + | 856874 - 857284 | 14808.9 |
| protein of unknown function | SAMN02910353_00766 | Not Available | + | 857292 - 857660 | 13658.4 |
| hypothetical protein | SAMN02910353_00767 | Not Available | + | 857773 - 858198 | 14688.7 |
| molecular chaperone dnaj | SAMN02910353_00768 | Not Available | - | 858389 - 859537 | 41578.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.