Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative efflux protein, mate family | SAMN02910353_00729 | Not Available | - | 820998 - 822332 | 49677.4 |
| hypothetical protein | SAMN02910353_00730 | Not Available | + | 822610 - 823014 | 15661.9 |
| rhodanese-related sulfurtransferase | SAMN02910353_00731 | Not Available | - | 823731 - 824033 | 11075.2 |
| thiazole biosynthesis adenylyltransferase thif, e. coli subfamily | SAMN02910353_00732 | Not Available | + | 824062 - 824868 | 28722.0 |
| act domain-containing protein | SAMN02910353_00733 | Not Available | + | 825137 - 825382 | 9057.15 |
| glutamate--cysteine ligase | SAMN02910353_00734 | Not Available | + | 825392 - 826525 | 43495.8 |
| glutamine amidotransferase | SAMN02910353_00735 | Not Available | + | 826539 - 827297 | 28872.2 |
| hypothetical protein | SAMN02910353_00736 | Not Available | + | 827310 - 827759 | 17302.3 |
| hypothetical protein | SAMN02910353_00737 | Not Available | + | 827746 - 827955 | 7839.01 |
| mcrbc 5-methylcytosine restriction system component | SAMN02910353_00738 | Not Available | - | 828100 - 828909 | 30254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.