Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00709 | Not Available | + | 799088 - 801001 | 72896.4 |
| hypothetical protein | SAMN02910353_00710 | Not Available | - | 801032 - 801211 | 6767.18 |
| hypothetical protein | SAMN02910353_00711 | Not Available | - | 801224 - 801391 | 5984.8 |
| uncharacterized membrane protein ycap, duf421 family | SAMN02910353_00712 | Not Available | + | 801607 - 802314 | 26894.8 |
| superoxide dismutase, cu-zn family | SAMN02910353_00713 | Not Available | + | 802362 - 802856 | 17885.3 |
| putative amidase domain-containing protein | SAMN02910353_00714 | Not Available | + | 802853 - 803338 | 18265.6 |
| hypothetical protein | SAMN02910353_00715 | Not Available | - | 803457 - 805613 | 82702.5 |
| type iii restriction enzyme, res subunit | SAMN02910353_00716 | Not Available | - | 805859 - 808747 | 110081.0 |
| site-specific dna-methyltransferase (adenine-specific) | SAMN02910353_00717 | Not Available | - | 808749 - 810266 | 57697.6 |
| hypothetical protein | SAMN02910353_00718 | Not Available | - | 810259 - 810897 | 24261.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.