Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 3212230 - 3212242 | Not Available |
| Phage integrase family prophage lambdach01 | SAMN02910353_02802 | Not Available | + | 3212290 - 3213687 | 53287.0 |
| Attr | Not Available | Not Available | + | 3213854 - 3213866 | Not Available |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 1 - 162 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 3 - 295 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 79 - 1358 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 115 - 1145 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 220 - 336 | 18.01 |
| glutamine amidotransferase domain-containing protein | SAMN02910353_00001 | Not Available | + | 1758 - 2729 | 37210.2 |
| site-specific recombinase xerd | SAMN02910353_00002 | Not Available | + | 2729 - 3904 | 44917.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.