Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase 2c | SAMN02910353_00699 | Not Available | + | 789948 - 790868 | 34160.7 |
| tery-c metal binding domain-containing protein | SAMN02910353_00700 | Not Available | + | 790913 - 791269 | 13386.6 |
| hypothetical protein | SAMN02910353_00701 | Not Available | + | 791330 - 792112 | 30040.0 |
| hypothetical protein | SAMN02910353_00702 | Not Available | + | 792281 - 793315 | 40472.8 |
| hypothetical protein | SAMN02910353_00703 | Not Available | - | 793409 - 794560 | 45501.0 |
| hypothetical protein | SAMN02910353_00704 | Not Available | + | 794822 - 795187 | 13769.3 |
| hypothetical protein | SAMN02910353_00705 | Not Available | + | 795717 - 796196 | 18158.6 |
| hypothetical protein | SAMN02910353_00706 | Not Available | + | 796341 - 796565 | 8363.87 |
| site-specific dna recombinase | SAMN02910353_00707 | Not Available | + | 796687 - 798315 | 63322.8 |
| recombinase | SAMN02910353_00708 | Not Available | + | 798514 - 799008 | 19451.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.