Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00689 | Not Available | - | 779222 - 779380 | 5876.0 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN02910353_00690 | Not Available | - | 779462 - 781795 | 85768.2 |
| putative abc transport system atp-binding protein | SAMN02910353_00691 | Not Available | - | 781789 - 782553 | 27860.7 |
| hamp domain-containing protein | SAMN02910353_00692 | Not Available | - | 782680 - 783957 | 47057.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910353_00693 | Not Available | - | 783954 - 784655 | 26214.7 |
| hypothetical protein | SAMN02910353_00694 | Not Available | - | 784755 - 785423 | 25654.2 |
| Trna-thr | Not Available | Not Available | + | 785930 - 786005 | Not Available |
| hypothetical protein | SAMN02910353_00696 | Not Available | + | 786361 - 787866 | 57136.8 |
| protein kinase domain-containing protein | SAMN02910353_00697 | Not Available | + | 787868 - 789190 | 50433.6 |
| uncharacterized conserved protein yegl, contains vwa domain of tery type | SAMN02910353_00698 | Not Available | + | 789205 - 789954 | 27361.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.